2024-2025 Slovakia Cup | Rank | Player | Country | Team | Goals | Home Goals | Away Goals | Detail |
| 1 | Adam Hanes | Slovakia | Dukla Banska Bystrica | 6 | 0 | 6 | detail |
| 2 | Eric Bille | Ivory Coast | MSK Zilina | 6 | 0 | 6 | detail |
| 3 | Michal Duris | Slovakia | Spartak Trnava | 5 | 1 | 4 | detail |
| 4 | Denis Alijagic | Czech Republic | MSK Zilina | 5 | 0 | 5 | detail |
| 5 | Matej Trusa | Slovakia | Dunajska Streda | 5 | 0 | 5 | detail |
| 6 | Gabor Toth | Slovakia | KFC Komarno | 5 | 0 | 5 | detail |
| 7 | Marek Svec | Slovakia | FC Artmedia Petrzalka | 4 | 0 | 4 | detail |
| 8 | Robert Pich | Slovakia | Spartak Trnava | 4 | 0 | 4 | detail |
| 9 | Matej Madlenak | Slovakia | MFK Ruzomberok | 4 | 1 | 3 | detail |
| 10 | Martin Boda | Slovakia | MFK Ruzomberok | 4 | 0 | 4 | detail |
| 11 | Daniel Smekal | Czech Republic | Sport Podbrezova | 4 | 0 | 4 | detail |
| 12 | Marek Kuzma | Slovakia | Zlate Moravce | 4 | 2 | 2 | detail |
| 13 | Abdulhakim Daneji | Nigeria | Stara Lubovna | 4 | 0 | 4 | detail |
| 14 | Samuel Datko | Slovakia | Sport Podbrezova | 4 | 0 | 4 | detail |
| 15 | Martin Rymarenko | Slovakia | Dukla Banska Bystrica | 3 | 0 | 3 | detail |
| 16 | Jakub Paur | Slovakia | Spartak Trnava | 3 | 0 | 3 | detail |
| 17 | Patrik Ilko | Slovakia | MSK Zilina | 3 | 0 | 3 | detail |
| 18 | David Huf | Czech Republic | MFK Ruzomberok | 3 | 1 | 2 | detail |
| 19 | Adam Tucny | Slovakia | MFK Ruzomberok | 3 | 0 | 3 | detail |
| 20 | Marko Tolic | Croatia | Slovan Bratislava | 3 | 2 | 1 | detail |
| 21 | Elvis Isaac | Nigeria | Slovan Bratislava | 3 | 0 | 3 | detail |
| 22 | Aliou Diao | Senegal | Tatran Presov | 3 | 1 | 2 | detail |
| 23 | Landing Sagna | Senegal | Tatran Presov | 3 | 1 | 2 | detail |
| 24 | Yhoan Andzouana | Democratic Rep Congo | Dunajska Streda | 3 | 0 | 3 | detail |
| 25 | Erik Pecha | Slovakia | TJ Spartak Myjava | 3 | 3 | 0 | detail |
| 26 | Lucas Eduardo Ramos | Raca Bratislava | 3 | 3 | 0 | detail | |
| 27 | Karlo Miljanic | Croatia | FK Kosice | 3 | 0 | 3 | detail |
| 28 | David Copko | Slovakia | TJ Spartak Myjava | 3 | 3 | 0 | detail |
| 29 | Peter Mazan | Slovakia | FC Artmedia Petrzalka | 2 | 0 | 2 | detail |
| 30 | Patrik Danek | Slovakia | FC Artmedia Petrzalka | 2 | 0 | 2 | detail |